Я пытаюсь установить PLASMA на свой компьютер, но сначала он работает нормально, а затем терпит неудачу.
Я также попытался опубликовать сообщение об ошибке на доске сообщений PLASMA , однако он не был одобрен, я не уверен, активен ли этот сайт или нет.
Моя конечная цель — установить пакет HiPLARM R, поэтому я следую их инструкциям, опубликованным на Веб-сайт HiPLARM (с использованием OpenBLAS).
Вот шаги, которые я предпринял:
- Загрузите установщик PLASMA отсюда: http://icl.cs.utk.edu/plasma/software/index.html в мой каталог ~/Downloads (версия 2.7.1 на момент написания этой статьи, мне пришлось разорвать ссылку из-за ограничения в 2 ссылки)
- Запустите
tar -xf plasma-installer_2.7.1.tar.gz, чтобы он распаковался в ~/plasma-installer_2.7.1.tar.gz - В папке ~/plasma-installer_2.7.1.tar.gz выполните следующую команду (согласно инструкциям на веб-сайте HiPLARM):
./setup.py --prefix="/usr" --blaslib="-L/usr/lib -lopenblas" \
--cflags="-O3 -fPIC -I/usr/include" \
--fflags="-O3 -fPIC" --noopt="-fPIC" --downlapc \
--notesting --ldflags_c="-I/usr/include"
К сожалению, это то, что я получил, так как это не удалось.
Вот результат:
~/plasma-installer_2.7.1$ ./setup.py --prefix="/usr" --blaslib="-L/usr/lib -lopenblas" \
> --cflags="-O3 -fPIC -I/usr/include" \
> --fflags="-O3 -fPIC" --noopt="-fPIC" --downlapc \
> --notesting --ldflags_c="-I/usr/include"
========================================
Setting up the framework
NOOPT flags are -fPIC
Install directory is... /usr
Creating directory /home/erol/plasma-installer_2.7.1/build
Build directory is... /home/erol/plasma-installer_2.7.1/build
Checking if cc works... yes
Checking if the Fortran compiler works... yes
Setting Fortran mangling... -DADD_
Setting download command...
Checking availablility of wget... available
Testing wget... working
Setting ranlib command... /usr/bin/ranlib
Detecting Fortran compiler... GNU
Detecting C compiler... GNU
Selected C compiler flags: -O3 -fPIC -I/usr/include
Selected Fortran compiler flags: -O3 -fPIC
Selected loader flags (C main): -I/usr/include
Selected loader flags (Fortran main): -I/usr/include
Checking loader... works
The C compiler is... cc
C flags are... -O3 -fPIC -I/usr/include
The Fortran compiler is... gfortran
Fortran flags are... -O3 -fPIC
Ar flags are... rc
BLAS library is... -L/usr/lib -lopenblas
CBLAS library is... Check if included in Blas Library
LAPACK library is... Check if included in Blas library
LAPACK C Interface library is... REFERENCE LAPACKE INTERFACE ( To download )
========================================
LAPACK C interface installation/verification
========================================
The reference LAPACK C interface is being installed.
Downloading reference LAPACK C interface... Creating directory /home/erol/plasma-installer_2.7.1/build/download
done
Unzip and untar reference LAPACK C interface... done
Compile and generate reference LAPACK C interface... Installation of reference LAPACK C interface successful.
(log is in /home/erol/plasma-installer_2.7.1/build/log/lapackcwrapperlog )
Traceback (most recent call last):
File "./setup.py", line 70, in <module>
sys.exit(main(sys.argv))
File "./setup.py", line 63, in main
Lapcwrapper(config, plasma)
File "/home/erol/plasma-installer_2.7.1/script/lapcwrapper.py", line 42, in __init__
self.down_install_lapc()
File "/home/erol/plasma-installer_2.7.1/script/lapcwrapper.py", line 268, in down_install_lapc
shutil.copy('liblapacke.a',os.path.join(self.prefix,'lib/liblapacke.a'))
File "/usr/lib/python2.7/shutil.py", line 119, in copy
copyfile(src, dst)
File "/usr/lib/python2.7/shutil.py", line 83, in copyfile
with open(dst, 'wb') as fdst:
IOError: [Errno 13] Permission denied: '/usr/lib/liblapacke.a'
Вот содержимое файла /home/erol/plasma-installer_2.7.1/build/log/lapackcwrapperlog:
( cd INSTALL; make; ./testlsame; ./testslamch; ./testdlamch; \
./testsecond; ./testdsecnd; ./testieee; ./testversion )
make[1]: Entering directory `/home/erol/plasma-installer_2.7.1/build/lapack-3.5.0/INSTALL'
make[1]: Nothing to be done for `all'.
make[1]: Leaving directory `/home/erol/plasma-installer_2.7.1/build/lapack-3.5.0/INSTALL'
ASCII character set
Tests completed
Epsilon = 5.96046448E-08
Safe minimum = 1.17549435E-38
Base = 2.00000000
Precision = 1.19209290E-07
Number of digits in mantissa = 24.0000000
Rounding mode = 1.00000000
Minimum exponent = -125.000000
Underflow threshold = 1.17549435E-38
Largest exponent = 128.000000
Overflow threshold = 3.40282347E+38
Reciprocal of safe minimum = 8.50705917E+37
Epsilon = 1.1102230246251565E-016
Safe minimum = 2.2250738585072014E-308
Base = 2.0000000000000000
Precision = 2.2204460492503131E-016
Number of digits in mantissa = 53.000000000000000
Rounding mode = 1.0000000000000000
Minimum exponent = -1021.0000000000000
Underflow threshold = 2.2250738585072014E-308
Largest exponent = 1024.0000000000000
Overflow threshold = 1.7976931348623157E+308
Reciprocal of safe minimum = 4.4942328371557898E+307
Time for 0.100E+09 SAXPY ops = 0.785E-02 seconds
SAXPY performance rate = 0.127E+05 mflops
Including SECOND, time = 0.163E-01 seconds
Average time for SECOND = 0.169E-03 milliseconds
Equivalent floating point ops = 0.216E+04 ops
Time for 0.100E+09 DAXPY ops = 0.139E-01 seconds
DAXPY performance rate = 0.721E+04 mflops
Including DSECND, time = 0.230E-01 seconds
Average time for DSECND = 0.182E-03 milliseconds
Equivalent floating point ops = 0.132E+04 ops
We are about to check whether infinity arithmetic
can be trusted. If this test hangs, set
ILAENV = 0 for ISPEC = 10 in LAPACK/SRC/ilaenv.f
Infinity arithmetic performed as per the ieee spec.
However, this is not an exhaustive test and does not
guarantee that infinity arithmetic meets the ieee spec.
We are about to check whether NaN arithmetic
can be trusted. If this test hangs, set
ILAENV = 0 for ISPEC = 11 in LAPACK/SRC/ilaenv.f
NaN arithmetic performed as per the ieee spec.
However, this is not an exhaustive test and does not
guarantee that NaN arithmetic meets the ieee spec.
LAPACK 3 . 5 . 0
( cd SRC; make )
make[1]: Entering directory `/home/erol/plasma-installer_2.7.1/build/lapack-3.5.0/SRC'
make[1]: Nothing to be done for `all'.
make[1]: Leaving directory `/home/erol/plasma-installer_2.7.1/build/lapack-3.5.0/SRC'
( cd lapacke; make )
make[1]: Entering directory `/home/erol/plasma-installer_2.7.1/build/lapack-3.5.0/lapacke'
cd include && cp lapacke_mangling_with_flags.h lapacke_mangling.h
cd src && make
make[2]: Entering directory `/home/erol/plasma-installer_2.7.1/build/lapack-3.5.0/lapacke/src'
make[2]: Nothing to be done for `all'.
make[2]: Leaving directory `/home/erol/plasma-installer_2.7.1/build/lapack-3.5.0/lapacke/src'
cd utils && make
make[2]: Entering directory `/home/erol/plasma-installer_2.7.1/build/lapack-3.5.0/lapacke/utils'
ar rc ../../liblapacke.a lapacke_cgb_nancheck.o lapacke_cgb_trans.o lapacke_cge_nancheck.o lapacke_cge_trans.o lapacke_cgg_nancheck.o lapacke_cgg_trans.o lapacke_cgt_nancheck.o lapacke_chb_nancheck.o lapacke_chb_trans.o lapacke_che_nancheck.o lapacke_che_trans.o lapacke_chp_nancheck.o lapacke_chp_trans.o lapacke_chs_nancheck.o lapacke_chs_trans.o lapacke_c_nancheck.o lapacke_cpb_nancheck.o lapacke_cpb_trans.o lapacke_cpf_nancheck.o lapacke_cpf_trans.o lapacke_cpo_nancheck.o lapacke_cpo_trans.o lapacke_cpp_nancheck.o lapacke_cpp_trans.o lapacke_cpt_nancheck.o lapacke_csp_nancheck.o lapacke_csp_trans.o lapacke_cst_nancheck.o lapacke_csy_nancheck.o lapacke_csy_trans.o lapacke_ctb_nancheck.o lapacke_ctb_trans.o lapacke_ctf_nancheck.o lapacke_ctf_trans.o lapacke_ctp_nancheck.o lapacke_ctp_trans.o lapacke_ctr_nancheck.o lapacke_ctr_trans.o lapacke_dgb_nancheck.o lapacke_dgb_trans.o lapacke_dge_nancheck.o lapacke_dge_trans.o lapacke_dgg_nancheck.o lapacke_dgg_trans.o lapacke_dgt_nancheck.o lapacke_dhs_nancheck.o lapacke_dhs_trans.o lapacke_d_nancheck.o lapacke_dpb_nancheck.o lapacke_dpb_trans.o lapacke_dpf_nancheck.o lapacke_dpf_trans.o lapacke_dpo_nancheck.o lapacke_dpo_trans.o lapacke_dpp_nancheck.o lapacke_dpp_trans.o lapacke_dpt_nancheck.o lapacke_dsb_nancheck.o lapacke_dsb_trans.o lapacke_dsp_nancheck.o lapacke_dsp_trans.o lapacke_dst_nancheck.o lapacke_dsy_nancheck.o lapacke_dsy_trans.o lapacke_dtb_nancheck.o lapacke_dtb_trans.o lapacke_dtf_nancheck.o lapacke_dtf_trans.o lapacke_dtp_nancheck.o lapacke_dtp_trans.o lapacke_dtr_nancheck.o lapacke_dtr_trans.o lapacke_lsame.o lapacke_sgb_nancheck.o lapacke_sgb_trans.o lapacke_sge_nancheck.o lapacke_sge_trans.o lapacke_sgg_nancheck.o lapacke_sgg_trans.o lapacke_sgt_nancheck.o lapacke_shs_nancheck.o lapacke_shs_trans.o lapacke_s_nancheck.o lapacke_spb_nancheck.o lapacke_spb_trans.o lapacke_spf_nancheck.o lapacke_spf_trans.o lapacke_spo_nancheck.o lapacke_spo_trans.o lapacke_spp_nancheck.o lapacke_spp_trans.o lapacke_spt_nancheck.o lapacke_ssb_nancheck.o lapacke_ssb_trans.o lapacke_ssp_nancheck.o lapacke_ssp_trans.o lapacke_sst_nancheck.o lapacke_ssy_nancheck.o lapacke_ssy_trans.o lapacke_stb_nancheck.o lapacke_stb_trans.o lapacke_stf_nancheck.o lapacke_stf_trans.o lapacke_stp_nancheck.o lapacke_stp_trans.o lapacke_str_nancheck.o lapacke_str_trans.o lapacke_xerbla.o lapacke_zgb_nancheck.o lapacke_zgb_trans.o lapacke_zge_nancheck.o lapacke_zge_trans.o lapacke_zgg_nancheck.o lapacke_zgg_trans.o lapacke_zgt_nancheck.o lapacke_zhb_nancheck.o lapacke_zhb_trans.o lapacke_zhe_nancheck.o lapacke_zhe_trans.o lapacke_zhp_nancheck.o lapacke_zhp_trans.o lapacke_zhs_nancheck.o lapacke_zhs_trans.o lapacke_z_nancheck.o lapacke_zpb_nancheck.o lapacke_zpb_trans.o lapacke_zpf_nancheck.o lapacke_zpf_trans.o lapacke_zpo_nancheck.o lapacke_zpo_trans.o lapacke_zpp_nancheck.o lapacke_zpp_trans.o lapacke_zpt_nancheck.o lapacke_zsp_nancheck.o lapacke_zsp_trans.o lapacke_zst_nancheck.o lapacke_zsy_nancheck.o lapacke_zsy_trans.o lapacke_ztb_nancheck.o lapacke_ztb_trans.o lapacke_ztf_nancheck.o lapacke_ztf_trans.o lapacke_ztp_nancheck.o lapacke_ztp_trans.o lapacke_ztr_nancheck.o lapacke_ztr_trans.o lapacke_make_complex_float.o lapacke_make_complex_double.o
/usr/bin/ranlib ../../liblapacke.a
make[2]: Leaving directory `/home/erol/plasma-installer_2.7.1/build/lapack-3.5.0/lapacke/utils'
make[1]: Leaving directory `/home/erol/plasma-installer_2.7.1/build/lapack-3.5.0/lapacke'
( cd INSTALL; make; ./testlsame; ./testslamch; ./testdlamch; \
./testsecond; ./testdsecnd; ./testieee; ./testversion )
make[1]: Entering directory `/home/erol/plasma-installer_2.7.1/build/lapack-3.5.0/INSTALL'
make[1]: Nothing to be done for `all'.
make[1]: Leaving directory `/home/erol/plasma-installer_2.7.1/build/lapack-3.5.0/INSTALL'
ASCII character set
Tests completed
Epsilon = 5.96046448E-08
Safe minimum = 1.17549435E-38
Base = 2.00000000
Precision = 1.19209290E-07
Number of digits in mantissa = 24.0000000
Rounding mode = 1.00000000
Minimum exponent = -125.000000
Underflow threshold = 1.17549435E-38
Largest exponent = 128.000000
Overflow threshold = 3.40282347E+38
Reciprocal of safe minimum = 8.50705917E+37
Epsilon = 1.1102230246251565E-016
Safe minimum = 2.2250738585072014E-308
Base = 2.0000000000000000
Precision = 2.2204460492503131E-016
Number of digits in mantissa = 53.000000000000000
Rounding mode = 1.0000000000000000
Minimum exponent = -1021.0000000000000
Underflow threshold = 2.2250738585072014E-308
Largest exponent = 1024.0000000000000
Overflow threshold = 1.7976931348623157E+308
Reciprocal of safe minimum = 4.4942328371557898E+307
Time for 0.100E+09 SAXPY ops = 0.785E-02 seconds
SAXPY performance rate = 0.127E+05 mflops
Including SECOND, time = 0.163E-01 seconds
Average time for SECOND = 0.169E-03 milliseconds
Equivalent floating point ops = 0.216E+04 ops
Time for 0.100E+09 DAXPY ops = 0.139E-01 seconds
DAXPY performance rate = 0.721E+04 mflops
Including DSECND, time = 0.230E-01 seconds
Average time for DSECND = 0.182E-03 milliseconds
Equivalent floating point ops = 0.132E+04 ops
We are about to check whether infinity arithmetic
can be trusted. If this test hangs, set
ILAENV = 0 for ISPEC = 10 in LAPACK/SRC/ilaenv.f
Infinity arithmetic performed as per the ieee spec.
However, this is not an exhaustive test and does not
guarantee that infinity arithmetic meets the ieee spec.
We are about to check whether NaN arithmetic
can be trusted. If this test hangs, set
ILAENV = 0 for ISPEC = 11 in LAPACK/SRC/ilaenv.f
NaN arithmetic performed as per the ieee spec.
However, this is not an exhaustive test and does not
guarantee that NaN arithmetic meets the ieee spec.
LAPACK 3 . 5 . 0
( cd SRC; make )
make[1]: Entering directory `/home/erol/plasma-installer_2.7.1/build/lapack-3.5.0/SRC'
make[1]: Nothing to be done for `all'.
make[1]: Leaving directory `/home/erol/plasma-installer_2.7.1/build/lapack-3.5.0/SRC'
( cd lapacke; make )
make[1]: Entering directory `/home/erol/plasma-installer_2.7.1/build/lapack-3.5.0/lapacke'
cd include && cp lapacke_mangling_with_flags.h lapacke_mangling.h
cd src && make
make[2]: Entering directory `/home/erol/plasma-installer_2.7.1/build/lapack-3.5.0/lapacke/src'
make[2]: Nothing to be done for `all'.
make[2]: Leaving directory `/home/erol/plasma-installer_2.7.1/build/lapack-3.5.0/lapacke/src'
cd utils && make
make[2]: Entering directory `/home/erol/plasma-installer_2.7.1/build/lapack-3.5.0/lapacke/utils'
ar rc ../../liblapacke.a lapacke_cgb_nancheck.o lapacke_cgb_trans.o lapacke_cge_nancheck.o lapacke_cge_trans.o lapacke_cgg_nancheck.o lapacke_cgg_trans.o lapacke_cgt_nancheck.o lapacke_chb_nancheck.o lapacke_chb_trans.o lapacke_che_nancheck.o lapacke_che_trans.o lapacke_chp_nancheck.o lapacke_chp_trans.o lapacke_chs_nancheck.o lapacke_chs_trans.o lapacke_c_nancheck.o lapacke_cpb_nancheck.o lapacke_cpb_trans.o lapacke_cpf_nancheck.o lapacke_cpf_trans.o lapacke_cpo_nancheck.o lapacke_cpo_trans.o lapacke_cpp_nancheck.o lapacke_cpp_trans.o lapacke_cpt_nancheck.o lapacke_csp_nancheck.o lapacke_csp_trans.o lapacke_cst_nancheck.o lapacke_csy_nancheck.o lapacke_csy_trans.o lapacke_ctb_nancheck.o lapacke_ctb_trans.o lapacke_ctf_nancheck.o lapacke_ctf_trans.o lapacke_ctp_nancheck.o lapacke_ctp_trans.o lapacke_ctr_nancheck.o lapacke_ctr_trans.o lapacke_dgb_nancheck.o lapacke_dgb_trans.o lapacke_dge_nancheck.o lapacke_dge_trans.o lapacke_dgg_nancheck.o lapacke_dgg_trans.o lapacke_dgt_nancheck.o lapacke_dhs_nancheck.o lapacke_dhs_trans.o lapacke_d_nancheck.o lapacke_dpb_nancheck.o lapacke_dpb_trans.o lapacke_dpf_nancheck.o lapacke_dpf_trans.o lapacke_dpo_nancheck.o lapacke_dpo_trans.o lapacke_dpp_nancheck.o lapacke_dpp_trans.o lapacke_dpt_nancheck.o lapacke_dsb_nancheck.o lapacke_dsb_trans.o lapacke_dsp_nancheck.o lapacke_dsp_trans.o lapacke_dst_nancheck.o lapacke_dsy_nancheck.o lapacke_dsy_trans.o lapacke_dtb_nancheck.o lapacke_dtb_trans.o lapacke_dtf_nancheck.o lapacke_dtf_trans.o lapacke_dtp_nancheck.o lapacke_dtp_trans.o lapacke_dtr_nancheck.o lapacke_dtr_trans.o lapacke_lsame.o lapacke_sgb_nancheck.o lapacke_sgb_trans.o lapacke_sge_nancheck.o lapacke_sge_trans.o lapacke_sgg_nancheck.o lapacke_sgg_trans.o lapacke_sgt_nancheck.o lapacke_shs_nancheck.o lapacke_shs_trans.o lapacke_s_nancheck.o lapacke_spb_nancheck.o lapacke_spb_trans.o lapacke_spf_nancheck.o lapacke_spf_trans.o lapacke_spo_nancheck.o lapacke_spo_trans.o lapacke_spp_nancheck.o lapacke_spp_trans.o lapacke_spt_nancheck.o lapacke_ssb_nancheck.o lapacke_ssb_trans.o lapacke_ssp_nancheck.o lapacke_ssp_trans.o lapacke_sst_nancheck.o lapacke_ssy_nancheck.o lapacke_ssy_trans.o lapacke_stb_nancheck.o lapacke_stb_trans.o lapacke_stf_nancheck.o lapacke_stf_trans.o lapacke_stp_nancheck.o lapacke_stp_trans.o lapacke_str_nancheck.o lapacke_str_trans.o lapacke_xerbla.o lapacke_zgb_nancheck.o lapacke_zgb_trans.o lapacke_zge_nancheck.o lapacke_zge_trans.o lapacke_zgg_nancheck.o lapacke_zgg_trans.o lapacke_zgt_nancheck.o lapacke_zhb_nancheck.o lapacke_zhb_trans.o lapacke_zhe_nancheck.o lapacke_zhe_trans.o lapacke_zhp_nancheck.o lapacke_zhp_trans.o lapacke_zhs_nancheck.o lapacke_zhs_trans.o lapacke_z_nancheck.o lapacke_zpb_nancheck.o lapacke_zpb_trans.o lapacke_zpf_nancheck.o lapacke_zpf_trans.o lapacke_zpo_nancheck.o lapacke_zpo_trans.o lapacke_zpp_nancheck.o lapacke_zpp_trans.o lapacke_zpt_nancheck.o lapacke_zsp_nancheck.o lapacke_zsp_trans.o lapacke_zst_nancheck.o lapacke_zsy_nancheck.o lapacke_zsy_trans.o lapacke_ztb_nancheck.o lapacke_ztb_trans.o lapacke_ztf_nancheck.o lapacke_ztf_trans.o lapacke_ztp_nancheck.o lapacke_ztp_trans.o lapacke_ztr_nancheck.o lapacke_ztr_trans.o lapacke_make_complex_float.o lapacke_make_complex_double.o
/usr/bin/ranlib ../../liblapacke.a
make[2]: Leaving directory `/home/erol/plasma-installer_2.7.1/build/lapack-3.5.0/lapacke/utils'
make[1]: Leaving directory `/home/erol/plasma-installer_2.7.1/build/lapack-3.5.0/lapacke'
Любые отзывы о том, как установить это успешно, будут очень признательны.
Спасибо за вашу помощь.
